Publications

Articles

Search Title, Authors, Abstract, Year

2012

Parameters in dynamic models of complex traits are containers of missing heritability
Wang Y, Gjuvsland A, Vik JP, Smith NP, Hunter PJ, Omholt SW
PLoS Computational Biology 8(4): e1002459, 2012. PMCID: PMC3320574
Specification, construction, and exact reduction of state transition system models of biochemical processes
Bugenhagen SM, Beard DA
J Chem Phys. 137(15): 154108, 2012.  PMCID: PMC3487925
Myocardial twitch duration and the dependence of oxygen consumption on pressure-volume area: Experiments and modelling.
Han JC, Tran K, Taberner AJ, Nickerson DP, Kirton RS, Nielsen PMF, Ward ML, Nash MP, Crampin EJ, Loiselle DS
Journal of Physiology. 590(18): 4401-22, 2012. PMCID: PMC3477760
Patient specific parameter estimation and heart rate regulation
Olufsen MS, Ottesen JT
J Math Biol. 23:1350078, 2012.
Simulation of rarefaction: impact on blood pressure in the systemic and pulmonary large and small arteries.
Olufsen MS, Hill NA, Vaughan GA, Sainsbury C, Johnson M
J Fluid Mech. 705: 280-305, 2012. PMID: 22962497 PMCID: PMC3433075
Modeling to link regional myocardial work, metabolism, and blood flows
Bassingthwaighte JB, Beard DA, Carlson BE, RK Dash, KC Vinnakota
Ann Biomed Eng. 40(11): 2379-98. PMCID: PMC3471663
Physiologically based pharmacokinetic tissue compartment model selection in drug development and risk assessment
Thompson MD, Beard DA
J Pharm Sci. 1: 424-35, 2012. PMCID: PMC3314064
Mechanisms of pressure-diuresis and pressure-natriuresis in Dahl salt-resistant and Dahl salt-sensitive rats
Beard, DA, Mescam M
BMC Physiol.  12: 6. PMCID: PMC3536597

2011

Characterization of Mg2+ inhibition of mitochondrial Ca2+ uptake by a mechanistic model of mitochondrial Ca2+ uniporter
Pradhan RK, Qi F, Beard DA, Dash RK
Biophys J. 101(9): 2071-81, 2011. PMID: 22067144, PMCID: PMC3207172
Development of appropriate equations for physiologically based pharmacokinetic modeling of permeability-limited and flow-limited transport
Thompson MD, Beard DA
J Pharmacokinet Pharmacodyn. 38(4): 405-21, 2011. PMID: 21584718, PMCID: PMC3193163
Comparison of models and acquisition techniques for estimation of myocardial blood flow from CT.
Alessio AM, Branch KR, Caldwell JH, Bassingthwaighte JB
Proc SPIE 7965: 11.1-11.6, 2011.
A parallel algorithm for reverse engineering of biological networks
Bazil JN, Qi F, Beard DA
Integr Biol. 3: 1215-23, 2011. PMCID: PMC3424073

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